K:\MS-MEDLINE>rem #+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ 

K:\MS-MEDLINE>rem #+ 

K:\MS-MEDLINE>rem #+     Mumps ISR Software Library 

K:\MS-MEDLINE>rem #+     Copyright (C) 2006 by Kevin C. O'Kane 

K:\MS-MEDLINE>rem #+ 

K:\MS-MEDLINE>rem #+     Kevin C. O'Kane 

K:\MS-MEDLINE>rem #+     okane@cs.uni.edu 

K:\MS-MEDLINE>rem #+ 

K:\MS-MEDLINE>rem #+ 

K:\MS-MEDLINE>rem #+ This program is free software; you can redistribute it and/or modify 

K:\MS-MEDLINE>rem #+ it under the terms of the GNU General Public License as published by 

K:\MS-MEDLINE>rem  #+ the Free Software Foundation; either version 2 of the License, or 

K:\MS-MEDLINE>rem #+ (at your option) any later version. 

K:\MS-MEDLINE>rem #+ 

K:\MS-MEDLINE>rem #+ This program is distributed in the hope that it will be useful, 

K:\MS-MEDLINE>rem #+ but WITHOUT ANY WARRANTY; without even the implied warranty of 

K:\MS-MEDLINE>rem #+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the 

K:\MS-MEDLINE>rem #+ GNU General Public License for more details. 

K:\MS-MEDLINE>rem #+ 

K:\MS-MEDLINE>rem #+ You should have received a copy of the GNU General Public License 

K:\MS-MEDLINE>rem #+ along with this program; if not, write to the Free Software 

K:\MS-MEDLINE>rem #+ Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA 

K:\MS-MEDLINE>rem #+ 

K:\MS-MEDLINE>rem #++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ 

K:\MS-MEDLINE>rem medline Interp.bat october 22, 2006 

K:\MS-MEDLINE>rem This code requires the GNU version of sort which has been renamed 

K:\MS-MEDLINE>rem to gnusort in order not to conflict with the WinXP program 

K:\MS-MEDLINE>rem of the same name.  You should place the renamed GNU sort program  

K:\MS-MEDLINE>rem in a directory normally in your search path, such as \windows 

K:\MS-MEDLINE>rem The GNU Win32 packages are available at: 

K:\MS-MEDLINE>rem http://gnuwin32.sourceforge.net/ 

K:\MS-MEDLINE>rem This code also requires the Win-32 Mumps interpreter (mumps.exe) 

K:\MS-MEDLINE>rem which should be placed in a directory normally in your search  

K:\MS-MEDLINE>rem path such as \windows. 

K:\MS-MEDLINE>rem mumps.exe is available at: http://www.cs.uni.edu/~okane/ 

K:\MS-MEDLINE>rem delete any prior data bases 

K:\MS-MEDLINE>date /t 
Thu 10/26/2006 

K:\MS-MEDLINE>time /t 
03:39 PM

K:\MS-MEDLINE>del key.dat 

K:\MS-MEDLINE>del data.dat 

K:\MS-MEDLINE>call cl -D_CRT_SECURE_NO_DEPRECATE /Fetranslate translate.c 
translate.c
Microsoft (R) Incremental Linker Version 8.00.50727.42
Copyright (C) Microsoft Corporation.  All rights reserved.

/out:translate.exe 
translate.obj 

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>mumps reformatX.mps   1>tmp1 

K:\MS-MEDLINE>mumps stemsX.mps  0<tmp1 1>translated.txt 

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=57

K:\MS-MEDLINE>del key.dat 

K:\MS-MEDLINE>del data.dat 

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>mumps dictionary.mps  1>dictionary.unsorted 

K:\MS-MEDLINE>echo gnusort is a renamed version of the gnu core utilities sort program 
gnusort is a renamed version of the gnu core utilities sort program

K:\MS-MEDLINE>gnusort -n dictionary.unsorted  1>dictionary.sorted 

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=60

K:\MS-MEDLINE>echo Count documents - grep is a gnu program 
Count documents - grep is a gnu program

K:\MS-MEDLINE>grep "xxxxx115" translated.txt   | wc  1>DocStats 

K:\MS-MEDLINE>type DocStats 
  50001  567632 4715644

K:\MS-MEDLINE>del key.dat 

K:\MS-MEDLINE>del data.dat 

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>set QUERY_STRING=max=4&min=50000 

K:\MS-MEDLINE>mumps stopselect.mps  0<dictionary.sorted 1>good 

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=1

K:\MS-MEDLINE>del dictionary.unsorted 

K:\MS-MEDLINE>del key.dat 

K:\MS-MEDLINE>del data.dat 

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>mumps idf.mps  1>idf.unsorted 

K:\MS-MEDLINE>gnusort -n  0<idf.unsorted 1>idf.sorted 

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=144

K:\MS-MEDLINE>del idf.unsorted 

K:\MS-MEDLINE>mumps sourceOffsets.mps 

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>set QUERY_STRING=idfmin=8 

K:\MS-MEDLINE>mumps weight.mps 

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=80

K:\MS-MEDLINE>echo Dump/restore 
Dump/restore

K:\MS-MEDLINE>ls -lh key.dat data.dat 
-rw-rw-rw-  1 user 0 7.5M 2006-10-26 15:48 data.dat
-rw-rw-rw-  1 user 0  48M 2006-10-26 15:48 key.dat

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>mumps dump.mps 

K:\MS-MEDLINE>del key.dat 

K:\MS-MEDLINE>del data.dat 

K:\MS-MEDLINE>mumps restore.mps 

K:\MS-MEDLINE>ls -lh key.dat data.dat 
-rw-rw-rw-  1 user 0 4.9M 2006-10-26 15:49 data.dat
-rw-rw-rw-  1 user 0  30M 2006-10-26 15:49 key.dat

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=28

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>mumps tt.mps  1>tt 

K:\MS-MEDLINE>gnusort -n  0<tt 1>tt.sorted 

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=70

K:\MS-MEDLINE>del tt 

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>mumps cohesion  1>cohesion 

K:\MS-MEDLINE>gnusort -n  0<cohesion 1>cohesion.sorted 

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=0

K:\MS-MEDLINE>del cohesion 

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>mumps jaccard-tt.mps  1>jaccard-tt 

K:\MS-MEDLINE>gnusort -n  0<jaccard-tt 1>jaccard-tt.sorted 

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=0

K:\MS-MEDLINE>del jaccard-tt 

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>mumps discrim3.mps 

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=63

K:\MS-MEDLINE>gnusort -n  0<discrim 1>discrim.sorted 

K:\MS-MEDLINE>ls -lh key.dat data.dat 
-rw-rw-rw-  1 user 0 5.9M 2006-10-26 15:51 data.dat
-rw-rw-rw-  1 user 0  37M 2006-10-26 15:51 key.dat

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>mumps dump.mps 

K:\MS-MEDLINE>del key.dat 

K:\MS-MEDLINE>del data.dat 

K:\MS-MEDLINE>mumps restore.mps 

K:\MS-MEDLINE>ls -lh key.dat data.dat 
-rw-rw-rw-  1 user 0 5.6M 2006-10-26 15:51 data.dat
-rw-rw-rw-  1 user 0  33M 2006-10-26 15:51 key.dat

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=33

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>set QUERY_STRING=ddmin=9 

K:\MS-MEDLINE>mumps docdoc3.mps  1>dd2 

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=28

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>mumps cluster.mps  1>clusters 

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=0

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>mumps ttfolder.mps  1>ttfolder 

K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=1

K:\MS-MEDLINE>mumps starttime.mps 

K:\MS-MEDLINE>mumps tab.mps  0<ttfolder 1>tab 

K:\MS-MEDLINE>mumps index.mps 
text/html 

<html>Web Folders</title></head>vlink=darkblue link=darkblue bgcolor=silver>
Mumps Web Folders, Copyright (C) 2001 Kevin C. O'Kane 
Web Folders comes with ABSOLUTELY NO WARRANTY; 
is free software, and you are welcome to redistribute it
certain conditions as set forth in the GNU GPL -->
<br><a href="index.cgi?array=lib&ml=2&a1=a"><img align=top src="/folder03.gif" border=0>
a<br><a href="index.cgi?array=lib&ml=2&a1=b"><img align=top src="/folder03.gif" border=0>
b<br><a href="index.cgi?array=lib&ml=2&a1=c"><img align=top src="/folder03.gif" border=0>
c<br><a href="index.cgi?array=lib&ml=2&a1=d"><img align=top src="/folder03.gif" border=0>
d<br><a href="index.cgi?array=lib&ml=2&a1=e"><img align=top src="/folder03.gif" border=0>
e<br><a href="index.cgi?array=lib&ml=2&a1=f"><img align=top src="/folder03.gif" border=0>
f<br><a href="index.cgi?array=lib&ml=2&a1=g"><img align=top src="/folder03.gif" border=0>
g<br><a href="index.cgi?array=lib&ml=2&a1=h"><img align=top src="/folder03.gif" border=0>
h<br><a href="index.cgi?array=lib&ml=2&a1=i"><img align=top src="/folder03.gif" border=0>
i<br><a href="index.cgi?array=lib&ml=2&a1=j"><img align=top src="/folder03.gif" border=0>
j<br><a href="index.cgi?array=lib&ml=2&a1=k"><img align=top src="/folder03.gif" border=0>
k<br><a href="index.cgi?array=lib&ml=2&a1=l"><img align=top src="/folder03.gif" border=0>
l<br><a href="index.cgi?array=lib&ml=2&a1=m"><img align=top src="/folder03.gif" border=0>
m<br><a href="index.cgi?array=lib&ml=2&a1=n"><img align=top src="/folder03.gif" border=0>
n<br><a href="index.cgi?array=lib&ml=2&a1=o"><img align=top src="/folder03.gif" border=0>
o<br><a href="index.cgi?array=lib&ml=2&a1=p"><img align=top src="/folder03.gif" border=0>
p<br><a href="index.cgi?array=lib&ml=2&a1=q"><img align=top src="/folder03.gif" border=0>
q<br><a href="index.cgi?array=lib&ml=2&a1=r"><img align=top src="/folder03.gif" border=0>
r<br><a href="index.cgi?array=lib&ml=2&a1=s"><img align=top src="/folder03.gif" border=0>
s<br><a href="index.cgi?array=lib&ml=2&a1=t"><img align=top src="/folder03.gif" border=0>
t<br><a href="index.cgi?array=lib&ml=2&a1=u"><img align=top src="/folder03.gif" border=0>
u<br><a href="index.cgi?array=lib&ml=2&a1=v"><img align=top src="/folder03.gif" border=0>
v<br><a href="index.cgi?array=lib&ml=2&a1=w"><img align=top src="/folder03.gif" border=0>
w<br><a href="index.cgi?array=lib&ml=2&a1=x"><img align=top src="/folder03.gif" border=0>
x<br><a href="index.cgi?array=lib&ml=2&a1=y"><img align=top src="/folder03.gif" border=0>
y<br><a href="index.cgi?array=lib&ml=2&a1=z"><img align=top src="/folder03.gif" border=0>
z
K:\MS-MEDLINE>mumps endtime.mps 
*** elapsed time=6

K:\MS-MEDLINE>echo ethanol  1>tstquery 

K:\MS-MEDLINE>mumps retrieve.mps  0<tstquery 
Enter query: 


<a href=http://en.wikipedia.org/wiki/Interaction+of+ethanol+with+blood+proteins%2E>Interaction of ethanol with blood proteins.</a>
<a href=http://en.wikipedia.org/wiki/Effects+of+ethanol+on+conjugated+gonadal+hormones+in+plasma+of+men%2E>Effects of ethanol on conjugated gonadal hormones in plasma of men.</a>
<a href=http://en.wikipedia.org/wiki/Behavioral+and+functional+studies+indicate+a+role+for+GABAAergic+transmission+in+the+actions+of+ethanol%2E>Behavioral and functional studies indicate a role for GABAAergic transmission in the actions of ethanol.</a>
<a href=http://en.wikipedia.org/wiki/Effect+of+ethanol+on+the+GABA%2Dbenzodiazepine+receptor+in+brain%2E>Effect of ethanol on the GABA-benzodiazepine receptor in brain.</a>
<a href=http://en.wikipedia.org/wiki/Comparison+of+the+effects+of+ethanol+on+beta%2Dadrenergic+receptors+in+heart+and+brain%2E>Comparison of the effects of ethanol on beta-adrenergic receptors in heart and brain.</a>
<a href=http://en.wikipedia.org/wiki/Percutaneous+ethanol+injection+in+the+treatment+of+liver+neoplasms%2E>Percutaneous ethanol injection in the treatment of liver neoplasms.</a>
<a href=http://en.wikipedia.org/wiki/Interaction+of+dichloromethane+and+ethanol+in+rats%3A+toxicokinetics+and+nerve+conduction+velocity%2E>Interaction of dichloromethane and ethanol in rats: toxicokinetics and nerve conduction velocity.</a>
<a href=http://en.wikipedia.org/wiki/Plasticizers+as+contaminants+in+commercial+ethanol%2E>Plasticizers as contaminants in commercial ethanol.</a>
<a href=http://en.wikipedia.org/wiki/Is+ethanol+antagonist+Ro15%2D4513+selective+for+ethanol%3F+%5Bletter%5D>Is ethanol antagonist Ro15-4513 selective for ethanol? [letter]</a>
<a href=http://en.wikipedia.org/wiki/Ethanol%2Dinduced+modulation+of+35S%2DTBPS+binding+to+brain+membranes%2E>Ethanol-induced modulation of 35S-TBPS binding to brain membranes.</a>
<a href=http://en.wikipedia.org/wiki/Differing+effects+of+carbohydrate%2C+fat+and+protein+on+the+rate+of+ethanol+metabolism%2E>Differing effects of carbohydrate, fat and protein on the rate of ethanol metabolism.</a>
<a href=http://en.wikipedia.org/wiki/Long%2Dterm+culture+of+hepatocytes%3A+ethanol+oxidation+and+effect+of+ethanol+on+enzyme+activities+and+albumin+secretion%2E>Long-term culture of hepatocytes: ethanol oxidation and effect of ethanol on enzyme activities and albumin secretion.</a>
<a href=http://en.wikipedia.org/wiki/Ethanol+modulation+of+plasma+norepinephrine+response+to+trauma+and+hemorrhage%2E>Ethanol modulation of plasma norepinephrine response to trauma and hemorrhage.</a>
<a href=http://en.wikipedia.org/wiki/Influence+of+ethanol+consumption+on+maternal%2Dfetal+transfer+of+zinc+in+pregnant+rats+on+day+14+of+pregnancy%2E>Influence of ethanol consumption on maternal-fetal transfer of zinc in pregnant rats on day 14 of pregnancy.</a>
<a href=http://en.wikipedia.org/wiki/Effects+of+acute+ethanol+administration+on+the+hepatic+xanthine+dehydrogenase%2Foxidase+system+in+the+rat%2E>Effects of acute ethanol administration on the hepatic xanthine dehydrogenase/oxidase system in the rat.</a>
<a href=http://en.wikipedia.org/wiki/Effect+of+ethanol+on+motor+performance+and+hippocampal+population+spikes+in+some+standard+and+selectively+outbred+rat+strains%2E>Effect of ethanol on motor performance and hippocampal population spikes in some standard and selectively outbred rat strains.</a>
<a href=http://en.wikipedia.org/wiki/The+effect+of+chronic+ethanol+feeding+on+ornithine+decarboxylase+activity+and+liver+regeneration%2E>The effect of chronic ethanol feeding on ornithine decarboxylase activity and liver regeneration.</a>
<a href=http://en.wikipedia.org/wiki/Acute+effects+of+ethanol+on+protein+synthesis+in+different+muscles+and+muscle+protein+fractions+of+the+rat%2E>Acute effects of ethanol on protein synthesis in different muscles and muscle protein fractions of the rat.</a>
<a href=http://en.wikipedia.org/wiki/Studies+on+the+mechanism+of+ethanol%2Dinduced+gastric+damage+in+rats%2E>Studies on the mechanism of ethanol-induced gastric damage in rats.</a>
<a href=http://en.wikipedia.org/wiki/Effects+of+intravenous+ethanol+on+hepatic+and+pancreatic+blood+flow+in+dogs%2E>Effects of intravenous ethanol on hepatic and pancreatic blood flow in dogs.</a>
<a href=http://en.wikipedia.org/wiki/Alterations+in+rat+brain+polyphosphoinositide+metabolism+due+to+acute+ethanol+administration%2E>Alterations in rat brain polyphosphoinositide metabolism due to acute ethanol administration.</a>
<a href=http://en.wikipedia.org/wiki/Are+the+biological+effects+of+ethanol+due+to+primary+interactions+with+lipids+or+with+proteins%3F>Are the biological effects of ethanol due to primary interactions with lipids or with proteins?</a>
<a href=http://en.wikipedia.org/wiki/Ethanol+tolerance+in+the+rat+after+inhalation+of+acetaldehyde+for+a+period+of+21+days%2E>Ethanol tolerance in the rat after inhalation of acetaldehyde for a period of 21 days.</a>
<a href=http://en.wikipedia.org/wiki/Retention+of+ethanol+tolerance+by+desglycinamide%2Darginine%2Dvasopressin+occurs+in+the+absence+of+changes+in+hippocampal+serotonin+synthesis%2E>Retention of ethanol tolerance by desglycinamide-arginine-vasopressin occurs in the absence of changes in hippocampal serotonin synthesis.</a>
<a href=http://en.wikipedia.org/wiki/Influence+of+pyridoxal+5%27%2Dphosphate+on+ethanol%2Dinduced+changes+in+histamine+catabolism+in+the+guinea+pig%2E>Influence of pyridoxal 5'-phosphate on ethanol-induced changes in histamine catabolism in the guinea pig.</a>
<a href=http://en.wikipedia.org/wiki/Effects+of+ethanol%2C+acetaldehyde%2C+and+lactate+on+proteoglycan+synthesis+and+proliferation+of+cultured+rat+liver+fat%2Dstoring+cells%2E>Effects of ethanol, acetaldehyde, and lactate on proteoglycan synthesis and proliferation of cultured rat liver fat-storing cells.</a>
<a href=http://en.wikipedia.org/wiki/Possible+mechanisms+of+acute+pancreatitis+induced+by+ethanol%2E>Possible mechanisms of acute pancreatitis induced by ethanol.</a>
<a href=http://en.wikipedia.org/wiki/Studies+of+stable+voluntary+intake+of+ethanol+induced+by+intermittent+ethanol+exposure%2E>Studies of stable voluntary intake of ethanol induced by intermittent ethanol exposure.</a>
<a href=http://en.wikipedia.org/wiki/Prenatal+ethanol+exposure+decreases+synaptic+density+in+the+molecular+layer+of+the+cerebellum%2E>Prenatal ethanol exposure decreases synaptic density in the molecular layer of the cerebellum.</a>
<a href=http://en.wikipedia.org/wiki/Ethanol+monitoring+of+irrigating+fluid+absorption+in+transurethral+prostatic+surgery%2E>Ethanol monitoring of irrigating fluid absorption in transurethral prostatic surgery.</a>

Time used: 0 seconds

K:\MS-MEDLINE>date /t 
Thu 10/26/2006 

K:\MS-MEDLINE>time /t 
03:52 PM