K:\MS-WIKI>rem #+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ K:\MS-WIKI>rem #+ K:\MS-WIKI>rem #+ Mumps ISR Software Library K:\MS-WIKI>rem #+ Copyright (C) 2006 by Kevin C. O'Kane K:\MS-WIKI>rem #+ K:\MS-WIKI>rem #+ Kevin C. O'Kane K:\MS-WIKI>rem #+ okane@cs.uni.edu K:\MS-WIKI>rem #+ K:\MS-WIKI>rem #+ K:\MS-WIKI>rem #+ This program is free software; you can redistribute it and/or modify K:\MS-WIKI>rem #+ it under the terms of the GNU General Public License as published by K:\MS-WIKI>rem #+ the Free Software Foundation; either version 2 of the License, or K:\MS-WIKI>rem #+ (at your option) any later version. K:\MS-WIKI>rem #+ K:\MS-WIKI>rem #+ This program is distributed in the hope that it will be useful, K:\MS-WIKI>rem #+ but WITHOUT ANY WARRANTY; without even the implied warranty of K:\MS-WIKI>rem #+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the K:\MS-WIKI>rem #+ GNU General Public License for more details. K:\MS-WIKI>rem #+ K:\MS-WIKI>rem #+ You should have received a copy of the GNU General Public License K:\MS-WIKI>rem #+ along with this program; if not, write to the Free Software K:\MS-WIKI>rem #+ Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA K:\MS-WIKI>rem #+ K:\MS-WIKI>rem #++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ K:\MS-WIKI>rem medline Combined.bat November 9, 2006 K:\MS-WIKI>rem delete any prior data bases K:\MS-WIKI>del key.dat K:\MS-WIKI>del data.dat K:\MS-WIKI>echo compile programs compile programs K:\MS-WIKI>date /t Thu 11/09/2006 K:\MS-WIKI>time /t 01:16 PM K:\MS-WIKI>call mumpsc CvtWikiFmt.mps ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating CvtWikiFmt.mps to C++: 37 lines of Mumps; 288 lines of C++ generated CvtWikiFmt.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:CvtWikiFmt.exe /stack:10000000 CvtWikiFmt.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... translate.c Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:translate.exe translate.obj ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating dictionary.mps to C++: 43 lines of Mumps; 378 lines of C++ generated dictionary.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:dictionary.exe /stack:10000000 dictionary.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating stopselect.mps to C++: 48 lines of Mumps; 378 lines of C++ generated stopselect.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:stopselect.exe /stack:10000000 stopselect.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating idf.mps to C++: 82 lines of Mumps; 740 lines of C++ generated idf.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:idf.exe /stack:10000000 idf.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating weight.mps to C++: 76 lines of Mumps; 1083 lines of C++ generated weight.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:weight.exe /stack:10000000 weight.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating restore.mps to C++: 2 lines of Mumps; 172 lines of C++ generated restore.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:restore.exe /stack:10000000 restore.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating dump.mps to C++: 2 lines of Mumps; 172 lines of C++ generated dump.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:dump.exe /stack:10000000 dump.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating tt.mps to C++: 42 lines of Mumps; 600 lines of C++ generated tt.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:tt.exe /stack:10000000 tt.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating docdoc3.mps to C++: 71 lines of Mumps; 855 lines of C++ generated docdoc3.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:docdoc3.exe /stack:10000000 docdoc3.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating wikiRetrieve.mps to C++: 72 lines of Mumps; 695 lines of C++ generated wikiRetrieve.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:wikiRetrieve.exe /stack:10000000 wikiRetrieve.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating reformatX.mps to C++: 49 lines of Mumps; 462 lines of C++ generated reformatX.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:reformatX.exe /stack:10000000 reformatX.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating stemsX.mps to C++: 37 lines of Mumps; 292 lines of C++ generated stemsX.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:stemsX.exe /stack:10000000 stemsX.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating discrim3.mps to C++: 130 lines of Mumps; 955 lines of C++ generated discrim3.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:discrim3.exe /stack:10000000 discrim3.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating jaccardtt.mps to C++: 32 lines of Mumps; 358 lines of C++ generated jaccardtt.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:jaccardtt.exe /stack:10000000 jaccardtt.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating cohesion.mps to C++: 39 lines of Mumps; 358 lines of C++ generated cohesion.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:cohesion.exe /stack:10000000 cohesion.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating cluster.mps to C++: 90 lines of Mumps; 974 lines of C++ generated cluster.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:cluster.exe /stack:10000000 cluster.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating ttfolder.mps to C++: 46 lines of Mumps; 527 lines of C++ generated ttfolder.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:ttfolder.exe /stack:10000000 ttfolder.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating tab.mps to C++: 64 lines of Mumps; 609 lines of C++ generated tab.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:tab.exe /stack:10000000 tab.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating index.mps to C++: 165 lines of Mumps; 1876 lines of C++ generated index.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:index.exe /stack:10000000 index.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating sourceOffsets.mps to C++: 38 lines of Mumps; 328 lines of C++ generated sourceOffsets.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:sourceOffsets.exe /stack:10000000 sourceOffsets.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating display.mps to C++: 118 lines of Mumps; 1216 lines of C++ generated display.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:display.exe /stack:10000000 display.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating index.mps to C++: 165 lines of Mumps; 1876 lines of C++ generated index.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:index.exe /stack:10000000 index.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating starttime.mps to C++: 30 lines of Mumps; 239 lines of C++ generated starttime.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:starttime.exe /stack:10000000 starttime.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... ... Compiling Mumps program The Mumps Compiler 9.00 Oct 28 2006 Translating endtime.mps to C++: 34 lines of Mumps; 257 lines of C++ generated endtime.cpp Microsoft (R) Incremental Linker Version 8.00.50727.42 Copyright (C) Microsoft Corporation. All rights reserved. /out:endtime.exe /stack:10000000 endtime.obj c:\mumpsc\lib\pcre.lib c:\mumpsc\lib\mumpslib1.lib Using Native Data Base .... Convert data base format Thu 11/09/2006 01:16 PM Conversion done - total time: *** elapsed time=150 ------------------- # delete any prior data bases Generate and sort word frequency list Thu 11/09/2006 01:19 PM Word frequency list done - total time *** elapsed time=1398 ------------------- Count documents Document grep result: 19314 61423 582743 "Select good words" Thu 11/09/2006 01:42 PM Good word selection time: *** elapsed time=3 ------------------- Generate and sort IDF weights Thu 11/09/2006 01:42 PM IDF time: *** elapsed time=698 ------------------- Get Offsets in source file Thu 11/09/2006 01:54 PM osu.medline not found Create weighted doc vectors Thu 11/09/2006 01:54 PM QUERY_STRING = idfmin=80 Weighting time: *** elapsed time=115 ------------------- Dump/restore Old data base sizes: -rw-rw-rw- 1 user 0 7.6M 2006-11-09 13:56 data.dat -rw-rw-rw- 1 user 0 89M 2006-11-09 13:56 key.dat New data base sizes -rw-rw-rw- 1 user 0 776K 2006-11-09 13:57 data.dat -rw-rw-rw- 1 user 0 5.3M 2006-11-09 13:57 key.dat Dump/restore time: *** elapsed time=78 ------------------- Calculate and sort term-term matrix Thu 11/09/2006 01:57 PM Term-term time: *** elapsed time=3 ------------------- Calculate and sort cohesion matrix Thu 11/09/2006 01:57 PM Cohesion time: *** elapsed time=0 ------------------- Calculate and sort jaccard term-term matrix Thu 11/09/2006 01:57 PM Term-term time: *** elapsed time=0 ------------------- Calculate discrimination co-efficients Thu 11/09/2006 01:57 PM discrim.mps time: *** elapsed time=8 ------------------- Dump/restore Thu 11/09/2006 01:57 PM Old data base size: -rw-rw-rw- 1 user 0 1.3M 2006-11-09 13:57 data.dat -rw-rw-rw- 1 user 0 8.3M 2006-11-09 13:57 key.dat New data base size: -rw-rw-rw- 1 user 0 1.3M 2006-11-09 13:57 data.dat -rw-rw-rw- 1 user 0 7.7M 2006-11-09 13:57 key.dat dump/restore end: *** elapsed time=8 ------------------- Calculate document-document matrix Thu 11/09/2006 01:57 PM QUERY_STRING = ddmin=9 Doc-doc time: *** elapsed time=0 ------------------- Calculate clusters Thu 11/09/2006 01:58 PM Cluster time: *** elapsed time=1 ------------------- Calculate hierarchy Thu 11/09/2006 01:58 PM Hierarchy time: *** elapsed time=1 ------------------- Calculate tables Thu 11/09/2006 01:58 PM Content-type: text/html Mumps Web Folders
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Hierarchy time *** elapsed time=2 ------------------- Thu 11/09/2006 01:58 PM Enter query: Royal Botanic Gardens, Kew Time used: 0 seconds